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  1. q2-SCNIC installation - Library Support - QIIME 2 Forum

    Aug 17, 2021 · Hi there, I'm new to using QIIME2. I have installation problem with q2-SCNIC now. I fallowed this installation guide GitHub - lozuponelab/q2-SCNIC: A QIIME2 plugin for running SCNIC …

  2. QIIME 2 2026.4 is now available!

    Apr 21, 2026 · Hello QIIME 2 community and happy spring! 🌻 We have a big release for you with lots of exciting updates 🥳 And as always, a huge thank you to everyone for their hard work and contributions …

  3. PhD Opportunity - Soil Microbial Ecology - QIIME 2 Forum

    Mar 23, 2023 · UTSA is a public research university and a Hispanic-Serving Institution located in scenic San Antonio, Texas. The main campus, where the graduate position will be housed, enrolls ~34,000 …

  4. how to reference the plugins used - QIIME 2 Forum

    Jan 8, 2022 · I wanted to ask if anyone can help me to know how to cite the qiime plugins (permanova, shannon, observed features, evenness, faith phylogenetic tree, braycurtis, scenic plugin, taxa …

  5. qiime2R installation issue - Library Support - QIIME 2 Forum

    Feb 13, 2020 · I have a problem with the installation of package. Namely, when I try to install it using "devtools::install_github ("jbisanz/qiime2R" I get the following error:

  6. taxonomy mitochondria vs D_4__Mitochondria - General Discussion

    Apr 21, 2025 · Also when I run this code I get 300 more taxonomy classifications removed than when using just D_4__ and same for Chloroplast, I get 0 when using D_3__ but 100 when using Chloroplast.

  7. UBC Okanagan, Quantitative Ecology - QIIME 2 Forum

    Jul 10, 2019 · Situated in the heart of the Okanagan Valley, one of the most scenic regions in Canada, it offers an intimate learning environment and excellent opportunities for regional, national, and …

  8. Importing bins/mags into Qiime2 - Technical Support - QIIME 2 Forum

    Mar 31, 2025 · Dear devs, dear users I am processing metagenome dataset. I currently follow the q2-moshpit: A set of tutorials showcasing shotgun metagenomics analysis workflows, but I modified …

  9. SILVA taxonomy - strange genus names - QIIME 2 Forum

    Feb 28, 2020 · Hi everyone, Is there any sense in SILVA taxonomy genus names like "uncultured bacterium", "gut metagenome", or they make no sense and for statistical analysis of …

  10. Group/filter sequences by metadata - QIIME 2 Forum

    Apr 25, 2018 · Hi, I tried to look for an answer for this question but found nothing similar- I want to filter my rep-seqs.qza (after it was clustered and filtered along the table.qza) to 2 groups, based on the …