Jul 21, 2025 · The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional …

Standard Nucleotide BLAST BLASTN programs search nucleotide databases using a nucleotide query. more...

Web BLAST quick start guide New BLAST databases New Guide to BLAST home and search pages Blast report description Blast topics Frequently Asked Questions Getting Help ¶ Write to …

Local alignments algorithms (such as BLAST) are most often used. A global alignment should only be used on sequences that share significant similarity over most of their extents, and then …

This title appears on all BLAST results and saved searches. Enter one or more queries in the top text box and one or more subject sequences in the lower text box. Then use the BLAST button …

You can expand a cluster on your BLAST results to view and download a report or the sequences of all member proteins, and you can also perform a BLAST alignment of all the members of …

The NCBI provides a suite of command-line tools to run BLAST called BLAST+. This allows users to perform BLAST searches on their own server without size, volume and database restrictions.

Smart Blast searches a protein query against the landmark database Enter Protein Query Sequence

Mar 17, 2025 · The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence …

The links in the Basic BLAST section of the Home tab lead to BLAST forms that share a common design. Each form has four sections (examples are from nucleotide BLAST):